Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZE50965.1 | mnaA | ERS672215_01308 | ERS672215_01756 | Virulence factor MviN family protein. | UDP-N-acetylglucosamine 2-epimerase. | 0.515 |
CZE50965.1 | rfbA | ERS672215_01308 | ERS672215_01759 | Virulence factor MviN family protein. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.765 |
CZE50965.1 | rfbB | ERS672215_01308 | ERS672215_01760 | Virulence factor MviN family protein. | dTDP-glucose 4%2C6-dehydratase. | 0.766 |
CZE50965.1 | tuaD | ERS672215_01308 | ERS672215_01749 | Virulence factor MviN family protein. | Nucleotide sugar dehydrogenase subfamily protein. | 0.413 |
CZE51405.1 | CZE51409.1 | ERS672215_01753 | ERS672215_01757 | Colanic acid exporter. | Iron compounds ABC transporter ATP-binding protein. | 0.837 |
CZE51405.1 | CZE51413.1 | ERS672215_01753 | ERS672215_01761 | Colanic acid exporter. | WxcM-like%2C C-terminal. | 0.404 |
CZE51405.1 | CZE51414.1 | ERS672215_01753 | ERS672215_01762 | Colanic acid exporter. | Hexapaptide repeat-containing transferase. | 0.594 |
CZE51405.1 | mnaA | ERS672215_01753 | ERS672215_01756 | Colanic acid exporter. | UDP-N-acetylglucosamine 2-epimerase. | 0.709 |
CZE51405.1 | rfbA | ERS672215_01753 | ERS672215_01759 | Colanic acid exporter. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.828 |
CZE51405.1 | rfbB | ERS672215_01753 | ERS672215_01760 | Colanic acid exporter. | dTDP-glucose 4%2C6-dehydratase. | 0.828 |
CZE51405.1 | tuaD | ERS672215_01753 | ERS672215_01749 | Colanic acid exporter. | Nucleotide sugar dehydrogenase subfamily protein. | 0.705 |
CZE51409.1 | CZE51405.1 | ERS672215_01757 | ERS672215_01753 | Iron compounds ABC transporter ATP-binding protein. | Colanic acid exporter. | 0.837 |
CZE51409.1 | CZE51413.1 | ERS672215_01757 | ERS672215_01761 | Iron compounds ABC transporter ATP-binding protein. | WxcM-like%2C C-terminal. | 0.776 |
CZE51409.1 | CZE51414.1 | ERS672215_01757 | ERS672215_01762 | Iron compounds ABC transporter ATP-binding protein. | Hexapaptide repeat-containing transferase. | 0.823 |
CZE51409.1 | kfoC | ERS672215_01757 | ERS672215_01758 | Iron compounds ABC transporter ATP-binding protein. | Putative glycosyltransferase. | 0.807 |
CZE51409.1 | mnaA | ERS672215_01757 | ERS672215_01756 | Iron compounds ABC transporter ATP-binding protein. | UDP-N-acetylglucosamine 2-epimerase. | 0.804 |
CZE51409.1 | rfbA | ERS672215_01757 | ERS672215_01759 | Iron compounds ABC transporter ATP-binding protein. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.861 |
CZE51409.1 | rfbB | ERS672215_01757 | ERS672215_01760 | Iron compounds ABC transporter ATP-binding protein. | dTDP-glucose 4%2C6-dehydratase. | 0.870 |
CZE51413.1 | CZE51405.1 | ERS672215_01761 | ERS672215_01753 | WxcM-like%2C C-terminal. | Colanic acid exporter. | 0.404 |
CZE51413.1 | CZE51409.1 | ERS672215_01761 | ERS672215_01757 | WxcM-like%2C C-terminal. | Iron compounds ABC transporter ATP-binding protein. | 0.776 |
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