STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crpTranscriptional regulator. (211 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.956
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.956
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.884
rpfG
Cyclic di-GMP phosphodiesterase response regulator RpfG.
   
 0.825
mscL
Large conductance mechanosensitive channel protein.
       0.780
acpP_3
Acyl carrier protein.
       0.779
psd_2
Phosphatidylserine decarboxylase.
       0.779
pta
Phosphate acetyltransferase (phosphotransacetylase).
  
 
 0.775
fimA
N-terminal methylation domain-containing protein.
       0.773
gltX_2
glutamylglutaminyl-tRNA synthetase.
  
 
  0.627
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.