hemE_2 protein (Campylobacter fetus) - STRING interaction network

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Score

hemE_2

Uroporphyrinogen decarboxylase. (81 aa)

Predicted Functional Partners:

rplS

0.950

rplQ

0.935

rpmB

0.933

rpmH

0.933

rplC

0.931

rplD

0.931

rplW

0.931

rplB

0.931

rplV

0.931

rplP

0.931

Your Current Organism:

Campylobacter fetus

NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hemE_2	rplB	ERS672215_01855	ERS672215_00008	Uroporphyrinogen decarboxylase.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.931
hemE_2	rplC	ERS672215_01855	ERS672215_00005	Uroporphyrinogen decarboxylase.	50S ribosomal protein L3.	0.931
hemE_2	rplD	ERS672215_01855	ERS672215_00006	Uroporphyrinogen decarboxylase.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.931
hemE_2	rplP	ERS672215_01855	ERS672215_00012	Uroporphyrinogen decarboxylase.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.931
hemE_2	rplQ	ERS672215_01855	ERS672215_00034	Uroporphyrinogen decarboxylase.	50S ribosomal protein L17.	0.935
hemE_2	rplS	ERS672215_01855	ERS672215_01564	Uroporphyrinogen decarboxylase.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.950
hemE_2	rplV	ERS672215_01855	ERS672215_00010	Uroporphyrinogen decarboxylase.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.931
hemE_2	rplW	ERS672215_01855	ERS672215_00007	Uroporphyrinogen decarboxylase.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.931
hemE_2	rpmB	ERS672215_01855	ERS672215_00501	Uroporphyrinogen decarboxylase.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.933
hemE_2	rpmH	ERS672215_01855	ERS672215_01691	Uroporphyrinogen decarboxylase.	LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.	0.933
rplB	hemE_2	ERS672215_00008	ERS672215_01855	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Uroporphyrinogen decarboxylase.	0.931
rplB	rplC	ERS672215_00008	ERS672215_00005	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L3.	0.999
rplB	rplD	ERS672215_00008	ERS672215_00006	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplB	rplP	ERS672215_00008	ERS672215_00012	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplB	rplQ	ERS672215_00008	ERS672215_00034	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L17.	0.993
rplB	rplS	ERS672215_00008	ERS672215_01564	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.992
rplB	rplV	ERS672215_00008	ERS672215_00010	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
rplB	rplW	ERS672215_00008	ERS672215_00007	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.999
rplB	rpmB	ERS672215_00008	ERS672215_00501	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.988
rplB	rpmH	ERS672215_00008	ERS672215_01691	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.	0.947