STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZE51515.1Uncharacterised protein. (180 aa)    
Predicted Functional Partners:
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.863
dcuA_2
Anaerobic C4-dicarboxylate transporter DcuA.
       0.800
CZE51510.1
Uncharacterised protein.
       0.800
CZE51511.1
Transformation system protein.
       0.800
pulD
Type II and III secretion system protein.
       0.800
CZE51513.1
Phosphoribosylaminoimidazole carboxylase.
       0.800
CZE51514.1
Transformation system protein.
       0.800
epsE
General secretion pathway protein E (Type II traffic warden ATPase)(cholera toxin secretion protein EpsE).
       0.800
epsF
Type II secretion system protein.
       0.800
rplI
Ribosomal protein L9.
   
   0.665
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.