STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFVI03293_0014Unannotated protein. (353 aa)    
Predicted Functional Partners:
rnhB
Unannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.800
CFVI03293_0016
Unannotated protein.
       0.783
CFVI03293_0577
Unannotated protein.
  
     0.774
CFVI03293_0552
Unannotated protein.
  
     0.773
ftsX
Unannotated protein.
  
     0.773
CFVI03293_1868
Unannotated protein.
  
     0.773
CFVI03293_0371
Unannotated protein.
  
     0.772
lolA
Unannotated protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.772
comL
Unannotated protein.
  
     0.772
ctsW
Unannotated protein.
  
     0.772
Your Current Organism:
Campylobacter fetus venerealis
NCBI taxonomy Id: 32020
Other names: ATCC 19438, C. fetus subsp. venerealis, CCUG 33899, CCUG 538, CIP 68.29, Campylobacter fetus subsp. venerealis, Campylobacter fetus subsp. venereus, DSM 18826, JCM 2528, LMG 6443, LMG:6443, NCTC 10354, Vibrio fetus subsp. venerealis, Vibrio foetus venerealis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.