Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CFVI03293_0238 | CFVI03293_0239 | GCA_001686885_00238 | GCA_001686885_00239 | Unannotated protein. | Unannotated protein. | 0.783 |
CFVI03293_0238 | cosR | GCA_001686885_00238 | GCA_001686885_00242 | Unannotated protein. | Unannotated protein. | 0.567 |
CFVI03293_0238 | cosS | GCA_001686885_00238 | GCA_001686885_00243 | Unannotated protein. | Unannotated protein. | 0.634 |
CFVI03293_0238 | fabH | GCA_001686885_00238 | GCA_001686885_00237 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.580 |
CFVI03293_0238 | folB | GCA_001686885_00238 | GCA_001686885_00241 | Unannotated protein. | Unannotated protein. | 0.772 |
CFVI03293_0238 | plsY | GCA_001686885_00238 | GCA_001686885_00240 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.772 |
CFVI03293_0239 | CFVI03293_0238 | GCA_001686885_00239 | GCA_001686885_00238 | Unannotated protein. | Unannotated protein. | 0.783 |
CFVI03293_0239 | cosR | GCA_001686885_00239 | GCA_001686885_00242 | Unannotated protein. | Unannotated protein. | 0.568 |
CFVI03293_0239 | cosS | GCA_001686885_00239 | GCA_001686885_00243 | Unannotated protein. | Unannotated protein. | 0.568 |
CFVI03293_0239 | fabH | GCA_001686885_00239 | GCA_001686885_00237 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.565 |
CFVI03293_0239 | folB | GCA_001686885_00239 | GCA_001686885_00241 | Unannotated protein. | Unannotated protein. | 0.790 |
CFVI03293_0239 | plsY | GCA_001686885_00239 | GCA_001686885_00240 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.790 |
cosR | CFVI03293_0238 | GCA_001686885_00242 | GCA_001686885_00238 | Unannotated protein. | Unannotated protein. | 0.567 |
cosR | CFVI03293_0239 | GCA_001686885_00242 | GCA_001686885_00239 | Unannotated protein. | Unannotated protein. | 0.568 |
cosR | cosS | GCA_001686885_00242 | GCA_001686885_00243 | Unannotated protein. | Unannotated protein. | 0.961 |
cosR | fabH | GCA_001686885_00242 | GCA_001686885_00237 | Unannotated protein. | Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.431 |
cosR | folB | GCA_001686885_00242 | GCA_001686885_00241 | Unannotated protein. | Unannotated protein. | 0.665 |
cosR | plsY | GCA_001686885_00242 | GCA_001686885_00240 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.608 |
cosS | CFVI03293_0238 | GCA_001686885_00243 | GCA_001686885_00238 | Unannotated protein. | Unannotated protein. | 0.634 |
cosS | CFVI03293_0239 | GCA_001686885_00243 | GCA_001686885_00239 | Unannotated protein. | Unannotated protein. | 0.568 |
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