Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CFVI03293_0406 | cheA | GCA_001686885_00409 | GCA_001686885_00330 | Unannotated protein. | Unannotated protein. | 0.837 |
CFVI03293_0406 | flgE2 | GCA_001686885_00409 | GCA_001686885_01852 | Unannotated protein. | Unannotated protein. | 0.928 |
CFVI03293_0406 | flhA | GCA_001686885_00409 | GCA_001686885_01157 | Unannotated protein. | Unannotated protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.682 |
CFVI03293_0406 | flhG | GCA_001686885_00409 | GCA_001686885_01556 | Unannotated protein. | Unannotated protein. | 0.771 |
CFVI03293_0406 | fliG | GCA_001686885_00409 | GCA_001686885_00266 | Unannotated protein. | Unannotated protein. | 0.682 |
CFVI03293_0406 | fliM | GCA_001686885_00409 | GCA_001686885_01559 | Unannotated protein. | Unannotated protein. | 0.683 |
CFVI03293_0406 | fliY | GCA_001686885_00409 | GCA_001686885_01560 | Unannotated protein. | Unannotated protein. | 0.924 |
CFVI03293_0406 | ispDF | GCA_001686885_00409 | GCA_001686885_00410 | Unannotated protein. | Unannotated protein; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF). | 0.817 |
CFVI03293_0406 | pgpA | GCA_001686885_00409 | GCA_001686885_00407 | Unannotated protein. | Unannotated protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). | 0.751 |
CFVI03293_0406 | sat | GCA_001686885_00409 | GCA_001686885_00408 | Unannotated protein. | Unannotated protein. | 0.819 |
cheA | CFVI03293_0406 | GCA_001686885_00330 | GCA_001686885_00409 | Unannotated protein. | Unannotated protein. | 0.837 |
cheA | flgE2 | GCA_001686885_00330 | GCA_001686885_01852 | Unannotated protein. | Unannotated protein. | 0.996 |
cheA | flhA | GCA_001686885_00330 | GCA_001686885_01157 | Unannotated protein. | Unannotated protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.919 |
cheA | flhG | GCA_001686885_00330 | GCA_001686885_01556 | Unannotated protein. | Unannotated protein. | 0.603 |
cheA | fliG | GCA_001686885_00330 | GCA_001686885_00266 | Unannotated protein. | Unannotated protein. | 0.956 |
cheA | fliM | GCA_001686885_00330 | GCA_001686885_01559 | Unannotated protein. | Unannotated protein. | 0.967 |
cheA | fliY | GCA_001686885_00330 | GCA_001686885_01560 | Unannotated protein. | Unannotated protein. | 0.999 |
flgE2 | CFVI03293_0406 | GCA_001686885_01852 | GCA_001686885_00409 | Unannotated protein. | Unannotated protein. | 0.928 |
flgE2 | cheA | GCA_001686885_01852 | GCA_001686885_00330 | Unannotated protein. | Unannotated protein. | 0.996 |
flgE2 | flhA | GCA_001686885_01852 | GCA_001686885_01157 | Unannotated protein. | Unannotated protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.980 |
page 1 of 4