STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actPUnannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (537 aa)    
Predicted Functional Partners:
CFVI03293_1327
Unannotated protein.
 
  
 0.994
kpsF
Unannotated protein; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  
 0.412
CFVI03293_1326
Unannotated protein.
       0.405
Your Current Organism:
Campylobacter fetus venerealis
NCBI taxonomy Id: 32020
Other names: ATCC 19438, C. fetus subsp. venerealis, CCUG 33899, CCUG 538, CIP 68.29, Campylobacter fetus subsp. venerealis, Campylobacter fetus subsp. venereus, DSM 18826, JCM 2528, LMG 6443, LMG:6443, NCTC 10354, Vibrio fetus subsp. venerealis, Vibrio foetus venerealis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.