STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000788295_00155Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_000788295_00158
Unannotated protein.
 
 0.999
GCA_000788295_00156
Unannotated protein.
  
 0.997
GCA_000788295_00161
Unannotated protein.
 
  
 0.891
GCA_000788295_00157
Unannotated protein.
 
  
 0.888
GCA_000788295_00165
Unannotated protein.
 
  
 0.747
GCA_000788295_00159
Unannotated protein.
  
  
 0.744
GCA_000788295_00160
Unannotated protein.
  
  
 0.741
dnaA
Unannotated protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.716
GCA_000788295_00163
Unannotated protein.
 
  
 0.676
galE
Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 0.647
Your Current Organism:
Campylobacter sputorum
NCBI taxonomy Id: 32024
Other names: C. sputorum biovar sputorum, Campylobacter sputorum biovar sputorum, Campylobacter sputorum bv. sputorum, Campylobacter sputorum sputorum, Campylobacter sputorum subsp. sputorum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.