Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000788295_00330 | GCA_000788295_00332 | GCA_000788295_00330 | GCA_000788295_00332 | Unannotated protein. | Unannotated protein. | 0.464 |
GCA_000788295_00330 | aas_2 | GCA_000788295_00330 | GCA_000788295_01085 | Unannotated protein. | Unannotated protein. | 0.473 |
GCA_000788295_00330 | fbaA | GCA_000788295_00330 | GCA_000788295_00422 | Unannotated protein. | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.419 |
GCA_000788295_00330 | macB | GCA_000788295_00330 | GCA_000788295_00568 | Unannotated protein. | Unannotated protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.482 |
GCA_000788295_00330 | pgi | GCA_000788295_00330 | GCA_000788295_00501 | Unannotated protein. | Unannotated protein; Belongs to the GPI family. | 0.421 |
GCA_000788295_00330 | putA | GCA_000788295_00330 | GCA_000788295_00746 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.577 |
GCA_000788295_00330 | tkt | GCA_000788295_00330 | GCA_000788295_01442 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.441 |
GCA_000788295_00330 | topA | GCA_000788295_00330 | GCA_000788295_01064 | Unannotated protein. | Unannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.435 |
GCA_000788295_00330 | uvrA_2 | GCA_000788295_00330 | GCA_000788295_00331 | Unannotated protein. | Unannotated protein. | 0.829 |
GCA_000788295_00330 | yjcC_2 | GCA_000788295_00330 | GCA_000788295_01405 | Unannotated protein. | Unannotated protein. | 0.434 |
GCA_000788295_00332 | GCA_000788295_00330 | GCA_000788295_00332 | GCA_000788295_00330 | Unannotated protein. | Unannotated protein. | 0.464 |
GCA_000788295_00332 | uvrA_2 | GCA_000788295_00332 | GCA_000788295_00331 | Unannotated protein. | Unannotated protein. | 0.464 |
aas_2 | GCA_000788295_00330 | GCA_000788295_01085 | GCA_000788295_00330 | Unannotated protein. | Unannotated protein. | 0.473 |
aas_2 | macB | GCA_000788295_01085 | GCA_000788295_00568 | Unannotated protein. | Unannotated protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.547 |
aas_2 | pgi | GCA_000788295_01085 | GCA_000788295_00501 | Unannotated protein. | Unannotated protein; Belongs to the GPI family. | 0.546 |
aas_2 | putA | GCA_000788295_01085 | GCA_000788295_00746 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.851 |
aas_2 | tkt | GCA_000788295_01085 | GCA_000788295_01442 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.497 |
fbaA | GCA_000788295_00330 | GCA_000788295_00422 | GCA_000788295_00330 | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Unannotated protein. | 0.419 |
fbaA | pgi | GCA_000788295_00422 | GCA_000788295_00501 | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Unannotated protein; Belongs to the GPI family. | 0.932 |
fbaA | putA | GCA_000788295_00422 | GCA_000788295_00746 | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.650 |
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