Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000788295_00643 | oprF | GCA_000788295_00643 | GCA_000788295_00911 | Unannotated protein. | Unannotated protein. | 0.741 |
GCA_000788295_00909 | flgE_1 | GCA_000788295_00909 | GCA_000788295_01209 | Unannotated protein. | Unannotated protein. | 0.811 |
GCA_000788295_00909 | gph_2 | GCA_000788295_00909 | GCA_000788295_00910 | Unannotated protein. | Unannotated protein. | 0.749 |
GCA_000788295_00909 | guaB | GCA_000788295_00909 | GCA_000788295_01094 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.775 |
GCA_000788295_00909 | mreB | GCA_000788295_00909 | GCA_000788295_00914 | Unannotated protein. | Unannotated protein. | 0.717 |
GCA_000788295_00909 | nifJ | GCA_000788295_00909 | GCA_000788295_00908 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000788295_00909 | oprF | GCA_000788295_00909 | GCA_000788295_00911 | Unannotated protein. | Unannotated protein. | 0.756 |
flgE_1 | GCA_000788295_00909 | GCA_000788295_01209 | GCA_000788295_00909 | Unannotated protein. | Unannotated protein. | 0.811 |
flgE_1 | motB | GCA_000788295_01209 | GCA_000788295_01536 | Unannotated protein. | Unannotated protein. | 0.955 |
flgE_1 | nifJ | GCA_000788295_01209 | GCA_000788295_00908 | Unannotated protein. | Unannotated protein. | 0.811 |
flgE_1 | oprF | GCA_000788295_01209 | GCA_000788295_00911 | Unannotated protein. | Unannotated protein. | 0.711 |
gph_2 | GCA_000788295_00909 | GCA_000788295_00910 | GCA_000788295_00909 | Unannotated protein. | Unannotated protein. | 0.749 |
gph_2 | guaB | GCA_000788295_00910 | GCA_000788295_01094 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.758 |
gph_2 | mreB | GCA_000788295_00910 | GCA_000788295_00914 | Unannotated protein. | Unannotated protein. | 0.484 |
gph_2 | nifJ | GCA_000788295_00910 | GCA_000788295_00908 | Unannotated protein. | Unannotated protein. | 0.749 |
gph_2 | oprF | GCA_000788295_00910 | GCA_000788295_00911 | Unannotated protein. | Unannotated protein. | 0.706 |
guaA | guaB | GCA_000788295_00316 | GCA_000788295_01094 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
guaA | oprF | GCA_000788295_00316 | GCA_000788295_00911 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.741 |
guaB | GCA_000788295_00909 | GCA_000788295_01094 | GCA_000788295_00909 | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Unannotated protein. | 0.775 |
guaB | gph_2 | GCA_000788295_01094 | GCA_000788295_00910 | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Unannotated protein. | 0.758 |
page 1 of 3