STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyDUnannotated protein. (200 aa)    
Predicted Functional Partners:
tag
Unannotated protein.
   
 
 0.911
rpsB
Unannotated protein; Belongs to the universal ribosomal protein uS2 family.
   
   0.836
ttcA
Unannotated protein; Belongs to the TtcA family.
 
     0.829
rpsC
Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
   
   0.801
hypB
Unannotated protein.
    
 
 0.787
mtnN
Unannotated protein; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
  
    0.780
fabD
Unannotated protein.
       0.779
rpsJ
Unannotated protein; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
    0.587
truD
Unannotated protein; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.
 
     0.579
trx_1
Unannotated protein; Belongs to the thioredoxin family.
  
   0.532
Your Current Organism:
Campylobacter sputorum
NCBI taxonomy Id: 32024
Other names: C. sputorum biovar sputorum, Campylobacter sputorum biovar sputorum, Campylobacter sputorum bv. sputorum, Campylobacter sputorum sputorum, Campylobacter sputorum subsp. sputorum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.