STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompR_3Unannotated protein. (654 aa)    
Predicted Functional Partners:
gsiA_1
Unannotated protein.
  
 
 0.775
dppD
Unannotated protein.
  
 
 0.736
nikB
Unannotated protein.
  
 
 0.720
dppB
Unannotated protein.
  
 
 0.720
nikC
Unannotated protein.
  
 
 0.612
gsiD
Unannotated protein.
  
 
 0.612
dppF
Unannotated protein.
  
 
 0.557
nikA
Unannotated protein.
  
 
 0.463
appA
Unannotated protein.
  
 
 0.463
GCA_000788295_01424
Unannotated protein.
  
    0.421
Your Current Organism:
Campylobacter sputorum
NCBI taxonomy Id: 32024
Other names: C. sputorum biovar sputorum, Campylobacter sputorum biovar sputorum, Campylobacter sputorum bv. sputorum, Campylobacter sputorum sputorum, Campylobacter sputorum subsp. sputorum
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.