Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD33589.1 | SFD33603.1 | SAMN04489710_101126 | SAMN04489710_101127 | Uncharacterized membrane protein. | NTE family protein. | 0.862 |
SFD33589.1 | SFD33613.1 | SAMN04489710_101126 | SAMN04489710_101128 | Uncharacterized membrane protein. | Histidine triad (HIT) family protein. | 0.677 |
SFD33589.1 | hisE | SAMN04489710_101126 | SAMN04489710_101125 | Uncharacterized membrane protein. | phosphoribosyl-ATP pyrophosphatase. | 0.862 |
SFD33589.1 | hisF | SAMN04489710_101126 | SAMN04489710_101123 | Uncharacterized membrane protein. | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.627 |
SFD33589.1 | hisI | SAMN04489710_101126 | SAMN04489710_101124 | Uncharacterized membrane protein. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.862 |
SFD33589.1 | tatA | SAMN04489710_101126 | SAMN04489710_101129 | Uncharacterized membrane protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.495 |
SFD33589.1 | tatB | SAMN04489710_101126 | SAMN04489710_101130 | Uncharacterized membrane protein. | Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.477 |
SFD33603.1 | SFD33589.1 | SAMN04489710_101127 | SAMN04489710_101126 | NTE family protein. | Uncharacterized membrane protein. | 0.862 |
SFD33603.1 | SFD33613.1 | SAMN04489710_101127 | SAMN04489710_101128 | NTE family protein. | Histidine triad (HIT) family protein. | 0.752 |
SFD33603.1 | SFD94426.1 | SAMN04489710_101127 | SAMN04489710_109141 | NTE family protein. | Polyhydroxyalkanoate synthase. | 0.679 |
SFD33603.1 | SFD97437.1 | SAMN04489710_101127 | SAMN04489710_110178 | NTE family protein. | Type IV secretion system protein VirD4. | 0.699 |
SFD33603.1 | SFE22871.1 | SAMN04489710_101127 | SAMN04489710_12028 | NTE family protein. | 3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.446 |
SFD33603.1 | hisE | SAMN04489710_101127 | SAMN04489710_101125 | NTE family protein. | phosphoribosyl-ATP pyrophosphatase. | 0.862 |
SFD33603.1 | hisF | SAMN04489710_101127 | SAMN04489710_101123 | NTE family protein. | Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.606 |
SFD33603.1 | hisI | SAMN04489710_101127 | SAMN04489710_101124 | NTE family protein. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.862 |
SFD33603.1 | tatA | SAMN04489710_101127 | SAMN04489710_101129 | NTE family protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.519 |
SFD33603.1 | tatB | SAMN04489710_101127 | SAMN04489710_101130 | NTE family protein. | Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.434 |
SFD33613.1 | SFD33589.1 | SAMN04489710_101128 | SAMN04489710_101126 | Histidine triad (HIT) family protein. | Uncharacterized membrane protein. | 0.677 |
SFD33613.1 | SFD33603.1 | SAMN04489710_101128 | SAMN04489710_101127 | Histidine triad (HIT) family protein. | NTE family protein. | 0.752 |
SFD33613.1 | hisE | SAMN04489710_101128 | SAMN04489710_101125 | Histidine triad (HIT) family protein. | phosphoribosyl-ATP pyrophosphatase. | 0.767 |
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