STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD32191.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SFD32433.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.758
SFD43138.1
Hypothetical protein.
  
     0.683
SFD43226.1
Glycosyltransferase, GT2 family.
 
   
 0.680
SFD32424.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.647
SFD43078.1
General secretion pathway protein L.
  
     0.609
SFE19240.1
Hypothetical protein.
  
     0.591
SFD32450.1
Tetratricopeptide repeat-containing protein.
 
     0.571
SFD72938.1
Multimeric flavodoxin WrbA.
  
     0.523
SFE19711.1
Hypothetical protein.
  
     0.510
SFE31264.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.