STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD34907.1Heavy metal response regulator. (232 aa)    
Predicted Functional Partners:
SFD80877.1
HAMP domain-containing protein.
 
0.976
SFE17923.1
Two-component system, unclassified family, sensor histidine kinase and response regulator.
  
0.975
SFD34931.1
Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system.
 
 0.974
SFE12242.1
PAS/PAC sensor hybrid histidine kinase.
 
 0.957
SFD62440.1
Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system.
 0.956
SFE06887.1
PAS domain S-box-containing protein.
 
 0.953
SFD44542.1
Hypothetical protein.
  
0.940
SFD63868.1
PAS domain S-box-containing protein.
 0.934
SFD94026.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.929
SFD54991.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.911
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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