STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD31951.1Sorbitol ABC transporter ATP-binding protein. (350 aa)    
Predicted Functional Partners:
SFD31918.1
Sorbitol ABC transporter membrane protein.
 
 0.996
SFD31938.1
Sorbitol ABC transporter membrane protein.
 
 0.995
ugpE
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.992
SFE24186.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.985
SFD81903.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.975
SFD81893.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 0.970
SFD31907.1
Sorbitol-binding protein /mannitol-binding protein.
 
 0.944
SFD78862.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.924
SFD78882.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.917
SFE24200.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.914
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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