STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD33069.1Iron complex outermembrane recepter protein. (730 aa)    
Predicted Functional Partners:
SFD34456.1
Hypothetical protein.
  
 
 0.819
SFD57771.1
Cell division and transport-associated protein TolA.
  
 
 0.819
SFD61858.1
Outer membrane transport energization protein TonB.
  
 
 0.819
SFD85615.1
Protein TonB.
  
 
 0.819
SFD33087.1
FecR family protein.
 
  
 0.802
SFD87163.1
Hypothetical protein.
  
 
 0.793
SFE06645.1
TonB family C-terminal domain-containing protein.
  
 
 0.793
SFD90218.1
Hypothetical protein.
    
 
 0.733
SFD33099.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.728
SFD69880.1
FecR family protein.
 
  
 0.724
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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