Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD33069.1 | SFD33087.1 | SAMN04489710_10183 | SAMN04489710_10185 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.802 |
SFD33069.1 | SFD33099.1 | SAMN04489710_10183 | SAMN04489710_10186 | Iron complex outermembrane recepter protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.728 |
SFD33069.1 | SFD34456.1 | SAMN04489710_10183 | SAMN04489710_101184 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.819 |
SFD33069.1 | SFD57771.1 | SAMN04489710_10183 | SAMN04489710_103350 | Iron complex outermembrane recepter protein. | Cell division and transport-associated protein TolA. | 0.819 |
SFD33069.1 | SFD61858.1 | SAMN04489710_10183 | SAMN04489710_10436 | Iron complex outermembrane recepter protein. | Outer membrane transport energization protein TonB. | 0.819 |
SFD33069.1 | SFD69880.1 | SAMN04489710_10183 | SAMN04489710_10530 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.724 |
SFD33069.1 | SFD85615.1 | SAMN04489710_10183 | SAMN04489710_107112 | Iron complex outermembrane recepter protein. | Protein TonB. | 0.819 |
SFD33069.1 | SFD87163.1 | SAMN04489710_10183 | SAMN04489710_107238 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.793 |
SFD33069.1 | SFD90218.1 | SAMN04489710_10183 | SAMN04489710_108125 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.733 |
SFD33069.1 | SFE06645.1 | SAMN04489710_10183 | SAMN04489710_11355 | Iron complex outermembrane recepter protein. | TonB family C-terminal domain-containing protein. | 0.793 |
SFD33087.1 | SFD33069.1 | SAMN04489710_10185 | SAMN04489710_10183 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.802 |
SFD33087.1 | SFD33099.1 | SAMN04489710_10185 | SAMN04489710_10186 | FecR family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.970 |
SFD33087.1 | SFD57771.1 | SAMN04489710_10185 | SAMN04489710_103350 | FecR family protein. | Cell division and transport-associated protein TolA. | 0.428 |
SFD33087.1 | SFD61858.1 | SAMN04489710_10185 | SAMN04489710_10436 | FecR family protein. | Outer membrane transport energization protein TonB. | 0.459 |
SFD33087.1 | SFD69880.1 | SAMN04489710_10185 | SAMN04489710_10530 | FecR family protein. | FecR family protein. | 0.536 |
SFD33099.1 | SFD33069.1 | SAMN04489710_10186 | SAMN04489710_10183 | RNA polymerase sigma-70 factor, ECF subfamily. | Iron complex outermembrane recepter protein. | 0.728 |
SFD33099.1 | SFD33087.1 | SAMN04489710_10186 | SAMN04489710_10185 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.970 |
SFD33099.1 | SFD69880.1 | SAMN04489710_10186 | SAMN04489710_10530 | RNA polymerase sigma-70 factor, ECF subfamily. | FecR family protein. | 0.861 |
SFD34456.1 | SFD33069.1 | SAMN04489710_101184 | SAMN04489710_10183 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.819 |
SFD57771.1 | SFD33069.1 | SAMN04489710_103350 | SAMN04489710_10183 | Cell division and transport-associated protein TolA. | Iron complex outermembrane recepter protein. | 0.819 |
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