Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD33502.1 | SFD44542.1 | SAMN04489710_101118 | SAMN04489710_102141 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.672 |
SFD33502.1 | SFD48493.1 | SAMN04489710_101118 | SAMN04489710_102375 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.700 |
SFD33502.1 | SFD55829.1 | SAMN04489710_101118 | SAMN04489710_103255 | Tetratricopeptide repeat-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.614 |
SFD44542.1 | SFD33502.1 | SAMN04489710_102141 | SAMN04489710_101118 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.672 |
SFD44542.1 | SFD48493.1 | SAMN04489710_102141 | SAMN04489710_102375 | Hypothetical protein. | Protein of unknown function. | 0.742 |
SFD44542.1 | SFD55829.1 | SAMN04489710_102141 | SAMN04489710_103255 | Hypothetical protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
SFD44542.1 | SFD63567.1 | SAMN04489710_102141 | SAMN04489710_104162 | Hypothetical protein. | TolB amino-terminal domain-containing protein. | 0.906 |
SFD44542.1 | SFE24454.1 | SAMN04489710_102141 | SAMN04489710_12141 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.988 |
SFD44542.1 | SFE30039.1 | SAMN04489710_102141 | SAMN04489710_12621 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.921 |
SFD48493.1 | SFD33502.1 | SAMN04489710_102375 | SAMN04489710_101118 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.700 |
SFD48493.1 | SFD44542.1 | SAMN04489710_102375 | SAMN04489710_102141 | Protein of unknown function. | Hypothetical protein. | 0.742 |
SFD48493.1 | SFD48518.1 | SAMN04489710_102375 | SAMN04489710_102376 | Protein of unknown function. | Hypothetical protein. | 0.951 |
SFD48493.1 | SFD48536.1 | SAMN04489710_102375 | SAMN04489710_102377 | Protein of unknown function. | Hypothetical protein. | 0.951 |
SFD48493.1 | SFD55829.1 | SAMN04489710_102375 | SAMN04489710_103255 | Protein of unknown function. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.762 |
SFD48493.1 | SFD63567.1 | SAMN04489710_102375 | SAMN04489710_104162 | Protein of unknown function. | TolB amino-terminal domain-containing protein. | 0.703 |
SFD48493.1 | SFE02656.1 | SAMN04489710_102375 | SAMN04489710_1121 | Protein of unknown function. | Hypothetical protein. | 0.784 |
SFD48493.1 | SFE24454.1 | SAMN04489710_102375 | SAMN04489710_12141 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.746 |
SFD48493.1 | SFE30039.1 | SAMN04489710_102375 | SAMN04489710_12621 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.779 |
SFD48493.1 | SFE30940.1 | SAMN04489710_102375 | SAMN04489710_12720 | Protein of unknown function. | Hypothetical protein. | 0.784 |
SFD48518.1 | SFD48493.1 | SAMN04489710_102376 | SAMN04489710_102375 | Hypothetical protein. | Protein of unknown function. | 0.951 |
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