Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFD53659.1 | SFD53692.1 | SAMN04489710_103130 | SAMN04489710_103132 | Phosphohistidine phosphatase, SixA. | Putative hemolysin. | 0.627 |
| SFD53659.1 | SFD53712.1 | SAMN04489710_103130 | SAMN04489710_103133 | Phosphohistidine phosphatase, SixA. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.446 |
| SFD53659.1 | ppk | SAMN04489710_103130 | SAMN04489710_103131 | Phosphohistidine phosphatase, SixA. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.844 |
| SFD53692.1 | SFD53659.1 | SAMN04489710_103132 | SAMN04489710_103130 | Putative hemolysin. | Phosphohistidine phosphatase, SixA. | 0.627 |
| SFD53692.1 | SFD53712.1 | SAMN04489710_103132 | SAMN04489710_103133 | Putative hemolysin. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.420 |
| SFD53692.1 | SFD84674.1 | SAMN04489710_103132 | SAMN04489710_10735 | Putative hemolysin. | Lyso-ornithine lipid acyltransferase. | 0.916 |
| SFD53692.1 | SFD90438.1 | SAMN04489710_103132 | SAMN04489710_108138 | Putative hemolysin. | MbtH protein. | 0.565 |
| SFD53692.1 | polA | SAMN04489710_103132 | SAMN04489710_11297 | Putative hemolysin. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.447 |
| SFD53692.1 | ppk | SAMN04489710_103132 | SAMN04489710_103131 | Putative hemolysin. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.627 |
| SFD53712.1 | SFD53659.1 | SAMN04489710_103133 | SAMN04489710_103130 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Phosphohistidine phosphatase, SixA. | 0.446 |
| SFD53712.1 | SFD53692.1 | SAMN04489710_103133 | SAMN04489710_103132 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Putative hemolysin. | 0.420 |
| SFD53712.1 | polA | SAMN04489710_103133 | SAMN04489710_11297 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.494 |
| SFD53712.1 | ppk | SAMN04489710_103133 | SAMN04489710_103131 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.407 |
| SFD84674.1 | SFD53692.1 | SAMN04489710_10735 | SAMN04489710_103132 | Lyso-ornithine lipid acyltransferase. | Putative hemolysin. | 0.916 |
| SFD90438.1 | SFD53692.1 | SAMN04489710_108138 | SAMN04489710_103132 | MbtH protein. | Putative hemolysin. | 0.565 |
| polA | SFD53692.1 | SAMN04489710_11297 | SAMN04489710_103132 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Putative hemolysin. | 0.447 |
| polA | SFD53712.1 | SAMN04489710_11297 | SAMN04489710_103133 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.494 |
| polA | ppk | SAMN04489710_11297 | SAMN04489710_103131 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.616 |
| ppk | SFD53659.1 | SAMN04489710_103131 | SAMN04489710_103130 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Phosphohistidine phosphatase, SixA. | 0.844 |
| ppk | SFD53692.1 | SAMN04489710_103131 | SAMN04489710_103132 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Putative hemolysin. | 0.627 |
page 1 of 2