Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD52024.1 | SFD52041.1 | SAMN04489710_10332 | SAMN04489710_10333 | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Sulfate transport system substrate-binding protein. | 0.999 |
SFD52024.1 | SFD52056.1 | SAMN04489710_10332 | SAMN04489710_10334 | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | Hypothetical protein. | 0.532 |
SFD52041.1 | SFD52024.1 | SAMN04489710_10333 | SAMN04489710_10332 | Sulfate transport system substrate-binding protein. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.999 |
SFD52041.1 | SFD52056.1 | SAMN04489710_10333 | SAMN04489710_10334 | Sulfate transport system substrate-binding protein. | Hypothetical protein. | 0.507 |
SFD52056.1 | SFD52024.1 | SAMN04489710_10334 | SAMN04489710_10332 | Hypothetical protein. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.532 |
SFD52056.1 | SFD52041.1 | SAMN04489710_10334 | SAMN04489710_10333 | Hypothetical protein. | Sulfate transport system substrate-binding protein. | 0.507 |
SFD52056.1 | SFD52072.1 | SAMN04489710_10334 | SAMN04489710_10335 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.445 |
SFD52056.1 | argC | SAMN04489710_10334 | SAMN04489710_108163 | Hypothetical protein. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | 0.424 |
SFD52072.1 | SFD52056.1 | SAMN04489710_10335 | SAMN04489710_10334 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.445 |
argC | SFD52056.1 | SAMN04489710_108163 | SAMN04489710_10334 | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily. | Hypothetical protein. | 0.424 |