STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD81987.1NitT/TauT family transport system ATP-binding protein. (342 aa)    
Predicted Functional Partners:
SFD82002.1
NitT/TauT family transport system permease protein.
 
 
 0.973
SFD81975.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.958
SFD81962.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.940
SFD54837.1
NitT/TauT family transport system permease protein.
 
 
 0.893
SFE13018.1
Nitrate/nitrite transport system permease protein.
 
 0.863
SFD66190.1
Sulfonate transport system permease protein.
 
 0.845
SFE13034.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.808
SFD34149.1
NitT/TauT family transport system permease protein.
 
 0.798
SFE17768.1
NitT/TauT family transport system permease protein.
 
 0.786
SFD82016.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
       0.774
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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