STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD86138.1Tripartite-type tricarboxylate transporter, receptor component TctC. (340 aa)    
Predicted Functional Partners:
SFD33876.1
TctA family transporter.
  
  
 0.834
SFD55698.1
Putative tricarboxylic transport membrane protein.
  
  
 0.777
SFD86150.1
DNA-binding transcriptional regulator, MarR family.
 
     0.677
SFD33862.1
Tripartite tricarboxylate transporter TctB family protein.
 
  
 0.611
SFD55738.1
Putative tricarboxylic transport membrane protein.
  
     0.530
SFD86121.1
Chromate transporter.
       0.481
SFD86161.1
2-polyprenyl-6-methoxyphenol hydroxylase.
       0.410
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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