Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD44542.1 | SFD52401.1 | SAMN04489710_102141 | SAMN04489710_10356 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SFD44542.1 | SFD55829.1 | SAMN04489710_102141 | SAMN04489710_103255 | Hypothetical protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
SFD44542.1 | SFD80877.1 | SAMN04489710_102141 | SAMN04489710_106222 | Hypothetical protein. | HAMP domain-containing protein. | 0.999 |
SFD44542.1 | SFD85037.1 | SAMN04489710_102141 | SAMN04489710_10763 | Hypothetical protein. | Regulatory protein, Fis family. | 0.917 |
SFD44542.1 | SFE04072.1 | SAMN04489710_102141 | SAMN04489710_11273 | Hypothetical protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.842 |
SFD44542.1 | SFE06887.1 | SAMN04489710_102141 | SAMN04489710_11370 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SFD44542.1 | SFE10662.1 | SAMN04489710_102141 | SAMN04489710_114110 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SFD44542.1 | SFE12242.1 | SAMN04489710_102141 | SAMN04489710_11514 | Hypothetical protein. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
SFD44542.1 | SFE17923.1 | SAMN04489710_102141 | SAMN04489710_11742 | Hypothetical protein. | Two-component system, unclassified family, sensor histidine kinase and response regulator. | 0.999 |
SFD44542.1 | SFE25855.1 | SAMN04489710_102141 | SAMN04489710_12240 | Hypothetical protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.842 |
SFD52401.1 | SFD44542.1 | SAMN04489710_10356 | SAMN04489710_102141 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.999 |
SFD52401.1 | SFD55829.1 | SAMN04489710_10356 | SAMN04489710_103255 | PAS domain S-box-containing protein. | Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
SFD52401.1 | SFD80877.1 | SAMN04489710_10356 | SAMN04489710_106222 | PAS domain S-box-containing protein. | HAMP domain-containing protein. | 0.999 |
SFD52401.1 | SFD85037.1 | SAMN04489710_10356 | SAMN04489710_10763 | PAS domain S-box-containing protein. | Regulatory protein, Fis family. | 0.830 |
SFD52401.1 | SFE04072.1 | SAMN04489710_10356 | SAMN04489710_11273 | PAS domain S-box-containing protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.493 |
SFD52401.1 | SFE06887.1 | SAMN04489710_10356 | SAMN04489710_11370 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFD52401.1 | SFE10662.1 | SAMN04489710_10356 | SAMN04489710_114110 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFD52401.1 | SFE12242.1 | SAMN04489710_10356 | SAMN04489710_11514 | PAS domain S-box-containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
SFD52401.1 | SFE17923.1 | SAMN04489710_10356 | SAMN04489710_11742 | PAS domain S-box-containing protein. | Two-component system, unclassified family, sensor histidine kinase and response regulator. | 0.999 |
SFD52401.1 | SFE25855.1 | SAMN04489710_10356 | SAMN04489710_12240 | PAS domain S-box-containing protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.493 |
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