STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD93170.12-methylaconitate cis-trans isomerase. (402 aa)    
Predicted Functional Partners:
SFD93156.1
Aconitate hydratase.
 
 
 0.998
SFD35099.1
Aconitate hydratase.
  
 
 0.957
SFD93187.1
Phosphoenolpyruvate phosphomutase.
 
  
 0.937
SFD46561.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
     
 0.893
SFD58027.1
Aconitase; Belongs to the aconitase/IPM isomerase family.
    
 0.891
SFD93139.1
2-methylcitrate synthase; Belongs to the citrate synthase family.
 
  
 0.882
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
     
 0.788
SFD81176.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
 
  
 0.765
SFD85022.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.733
SFD64920.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
    
 0.726
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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