STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE06859.1Uncharacterized conserved protein. (452 aa)    
Predicted Functional Partners:
SFD37830.1
Glycerophosphoryl diester phosphodiesterase.
 
   
  0.898
SFD54860.1
NitT/TauT family transport system substrate-binding protein.
  
     0.565
SFE06839.1
Uncharacterized membrane protein, DUF2068 family.
       0.538
SFE13482.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
  
     0.538
SFE06822.1
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.511
SFD78940.1
Glycerol-3-phosphate dehydrogenase.
     
  0.499
SFE06868.1
Predicted ATPase.
       0.480
SFE24501.1
GTP cyclohydrolase I.
  
  
  0.421
SFD81820.1
Dihydroneopterin aldolase.
  
  
  0.411
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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