Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD33003.1 | SFD47748.1 | SAMN04489710_10180 | SAMN04489710_102329 | Glutamate synthase (NADH) large subunit. | Amino acid adenylation domain-containing protein. | 0.421 |
SFD33003.1 | SFD73189.1 | SAMN04489710_10180 | SAMN04489710_105230 | Glutamate synthase (NADH) large subunit. | NADP-dependent aldehyde dehydrogenase. | 0.844 |
SFD33003.1 | SFD86761.1 | SAMN04489710_10180 | SAMN04489710_107205 | Glutamate synthase (NADH) large subunit. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.906 |
SFD33003.1 | SFD90409.1 | SAMN04489710_10180 | SAMN04489710_108136 | Glutamate synthase (NADH) large subunit. | Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein. | 0.780 |
SFD33003.1 | SFD96427.1 | SAMN04489710_10180 | SAMN04489710_11094 | Glutamate synthase (NADH) large subunit. | 4-hydroxybutyrate dehydrogenase. | 0.828 |
SFD33003.1 | SFE13919.1 | SAMN04489710_10180 | SAMN04489710_11597 | Glutamate synthase (NADH) large subunit. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.734 |
SFD33003.1 | bioF | SAMN04489710_10180 | SAMN04489710_102275 | Glutamate synthase (NADH) large subunit. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.418 |
SFD47748.1 | SFD33003.1 | SAMN04489710_102329 | SAMN04489710_10180 | Amino acid adenylation domain-containing protein. | Glutamate synthase (NADH) large subunit. | 0.421 |
SFD47748.1 | SFD73189.1 | SAMN04489710_102329 | SAMN04489710_105230 | Amino acid adenylation domain-containing protein. | NADP-dependent aldehyde dehydrogenase. | 0.612 |
SFD47748.1 | SFD86761.1 | SAMN04489710_102329 | SAMN04489710_107205 | Amino acid adenylation domain-containing protein. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.710 |
SFD47748.1 | SFD90409.1 | SAMN04489710_102329 | SAMN04489710_108136 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein. | 0.999 |
SFD47748.1 | SFE13919.1 | SAMN04489710_102329 | SAMN04489710_11597 | Amino acid adenylation domain-containing protein. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.767 |
SFD47748.1 | bioF | SAMN04489710_102329 | SAMN04489710_102275 | Amino acid adenylation domain-containing protein. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.765 |
SFD73189.1 | SFD33003.1 | SAMN04489710_105230 | SAMN04489710_10180 | NADP-dependent aldehyde dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.844 |
SFD73189.1 | SFD47748.1 | SAMN04489710_105230 | SAMN04489710_102329 | NADP-dependent aldehyde dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.612 |
SFD73189.1 | SFD86761.1 | SAMN04489710_105230 | SAMN04489710_107205 | NADP-dependent aldehyde dehydrogenase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.489 |
SFD73189.1 | SFD90409.1 | SAMN04489710_105230 | SAMN04489710_108136 | NADP-dependent aldehyde dehydrogenase. | Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein. | 0.682 |
SFD73189.1 | SFD96427.1 | SAMN04489710_105230 | SAMN04489710_11094 | NADP-dependent aldehyde dehydrogenase. | 4-hydroxybutyrate dehydrogenase. | 0.784 |
SFD73189.1 | SFE13919.1 | SAMN04489710_105230 | SAMN04489710_11597 | NADP-dependent aldehyde dehydrogenase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.713 |
SFD86761.1 | SFD33003.1 | SAMN04489710_107205 | SAMN04489710_10180 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate synthase (NADH) large subunit. | 0.906 |
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