Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD70667.1 | SFD73572.1 | SAMN04489710_10577 | SAMN04489710_105253 | Glycosyl transferases group 1. | Nodulation protein S (NodS). | 0.555 |
SFD70667.1 | SFD73622.1 | SAMN04489710_10577 | SAMN04489710_105256 | Glycosyl transferases group 1. | Glycosyl transferase family 2. | 0.461 |
SFD70667.1 | SFE15267.1 | SAMN04489710_10577 | SAMN04489710_11624 | Glycosyl transferases group 1. | Predicted arabinose efflux permease, MFS family. | 0.404 |
SFD73572.1 | SFD70667.1 | SAMN04489710_105253 | SAMN04489710_10577 | Nodulation protein S (NodS). | Glycosyl transferases group 1. | 0.555 |
SFD73572.1 | SFD73585.1 | SAMN04489710_105253 | SAMN04489710_105254 | Nodulation protein S (NodS). | N-acetylglucosaminyl deacetylase, LmbE family. | 0.994 |
SFD73572.1 | SFD73606.1 | SAMN04489710_105253 | SAMN04489710_105255 | Nodulation protein S (NodS). | Acyl-CoA dehydrogenase. | 0.988 |
SFD73572.1 | SFD73622.1 | SAMN04489710_105253 | SAMN04489710_105256 | Nodulation protein S (NodS). | Glycosyl transferase family 2. | 0.990 |
SFD73572.1 | SFE15267.1 | SAMN04489710_105253 | SAMN04489710_11624 | Nodulation protein S (NodS). | Predicted arabinose efflux permease, MFS family. | 0.530 |
SFD73585.1 | SFD73572.1 | SAMN04489710_105254 | SAMN04489710_105253 | N-acetylglucosaminyl deacetylase, LmbE family. | Nodulation protein S (NodS). | 0.994 |
SFD73585.1 | SFD73606.1 | SAMN04489710_105254 | SAMN04489710_105255 | N-acetylglucosaminyl deacetylase, LmbE family. | Acyl-CoA dehydrogenase. | 0.988 |
SFD73585.1 | SFD73622.1 | SAMN04489710_105254 | SAMN04489710_105256 | N-acetylglucosaminyl deacetylase, LmbE family. | Glycosyl transferase family 2. | 0.974 |
SFD73585.1 | SFE15267.1 | SAMN04489710_105254 | SAMN04489710_11624 | N-acetylglucosaminyl deacetylase, LmbE family. | Predicted arabinose efflux permease, MFS family. | 0.468 |
SFD73606.1 | SFD73572.1 | SAMN04489710_105255 | SAMN04489710_105253 | Acyl-CoA dehydrogenase. | Nodulation protein S (NodS). | 0.988 |
SFD73606.1 | SFD73585.1 | SAMN04489710_105255 | SAMN04489710_105254 | Acyl-CoA dehydrogenase. | N-acetylglucosaminyl deacetylase, LmbE family. | 0.988 |
SFD73606.1 | SFD73622.1 | SAMN04489710_105255 | SAMN04489710_105256 | Acyl-CoA dehydrogenase. | Glycosyl transferase family 2. | 0.959 |
SFD73606.1 | SFE15267.1 | SAMN04489710_105255 | SAMN04489710_11624 | Acyl-CoA dehydrogenase. | Predicted arabinose efflux permease, MFS family. | 0.540 |
SFD73622.1 | SFD70667.1 | SAMN04489710_105256 | SAMN04489710_10577 | Glycosyl transferase family 2. | Glycosyl transferases group 1. | 0.461 |
SFD73622.1 | SFD73572.1 | SAMN04489710_105256 | SAMN04489710_105253 | Glycosyl transferase family 2. | Nodulation protein S (NodS). | 0.990 |
SFD73622.1 | SFD73585.1 | SAMN04489710_105256 | SAMN04489710_105254 | Glycosyl transferase family 2. | N-acetylglucosaminyl deacetylase, LmbE family. | 0.974 |
SFD73622.1 | SFD73606.1 | SAMN04489710_105256 | SAMN04489710_105255 | Glycosyl transferase family 2. | Acyl-CoA dehydrogenase. | 0.959 |
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