STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE15692.1Hypothetical protein. (277 aa)    
Predicted Functional Partners:
SFE15720.1
Hypothetical protein.
 
     0.875
SFE15708.1
Hypothetical protein.
       0.855
SFE15847.1
DNA-binding transcriptional regulator, XRE family.
 
     0.718
SFE15672.1
Hypothetical protein.
 
     0.665
SFD84518.1
General secretion pathway protein J.
  
     0.637
SFD84572.1
Type II secretion system protein N (GspN).
  
     0.636
SFE01143.1
Protein of unknown function.
  
     0.634
SFD84533.1
General secretion pathway protein K.
  
     0.625
SFD90668.1
Hypothetical protein.
  
     0.585
SFD84545.1
General secretion pathway protein L.
  
     0.531
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
Server load: low (18%) [HD]