Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD33862.1 | SFD33876.1 | SAMN04489710_101148 | SAMN04489710_101149 | Tripartite tricarboxylate transporter TctB family protein. | TctA family transporter. | 0.954 |
SFD33862.1 | SFD55698.1 | SAMN04489710_101148 | SAMN04489710_103248 | Tripartite tricarboxylate transporter TctB family protein. | Putative tricarboxylic transport membrane protein. | 0.844 |
SFD33862.1 | SFE23211.1 | SAMN04489710_101148 | SAMN04489710_12047 | Tripartite tricarboxylate transporter TctB family protein. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.604 |
SFD33862.1 | SFE23229.1 | SAMN04489710_101148 | SAMN04489710_12048 | Tripartite tricarboxylate transporter TctB family protein. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.457 |
SFD33876.1 | SFD33862.1 | SAMN04489710_101149 | SAMN04489710_101148 | TctA family transporter. | Tripartite tricarboxylate transporter TctB family protein. | 0.954 |
SFD33876.1 | SFD55698.1 | SAMN04489710_101149 | SAMN04489710_103248 | TctA family transporter. | Putative tricarboxylic transport membrane protein. | 0.908 |
SFD33876.1 | SFE23211.1 | SAMN04489710_101149 | SAMN04489710_12047 | TctA family transporter. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.842 |
SFD33876.1 | SFE23229.1 | SAMN04489710_101149 | SAMN04489710_12048 | TctA family transporter. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.846 |
SFD55698.1 | SFD33862.1 | SAMN04489710_103248 | SAMN04489710_101148 | Putative tricarboxylic transport membrane protein. | Tripartite tricarboxylate transporter TctB family protein. | 0.844 |
SFD55698.1 | SFD33876.1 | SAMN04489710_103248 | SAMN04489710_101149 | Putative tricarboxylic transport membrane protein. | TctA family transporter. | 0.908 |
SFD55698.1 | SFE23211.1 | SAMN04489710_103248 | SAMN04489710_12047 | Putative tricarboxylic transport membrane protein. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.812 |
SFD55698.1 | SFE23229.1 | SAMN04489710_103248 | SAMN04489710_12048 | Putative tricarboxylic transport membrane protein. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.844 |
SFE23152.1 | SFE23179.1 | SAMN04489710_12043 | SAMN04489710_12045 | Conserved hypothetical protein, PP_1857 family. | formyl-CoA transferase; Belongs to the CoA-transferase III family. | 0.530 |
SFE23152.1 | SFE23199.1 | SAMN04489710_12043 | SAMN04489710_12046 | Conserved hypothetical protein, PP_1857 family. | hydroxymethylglutaryl-CoA lyase. | 0.530 |
SFE23152.1 | SFE23211.1 | SAMN04489710_12043 | SAMN04489710_12047 | Conserved hypothetical protein, PP_1857 family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.426 |
SFE23152.1 | SFE23229.1 | SAMN04489710_12043 | SAMN04489710_12048 | Conserved hypothetical protein, PP_1857 family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.405 |
SFE23179.1 | SFE23152.1 | SAMN04489710_12045 | SAMN04489710_12043 | formyl-CoA transferase; Belongs to the CoA-transferase III family. | Conserved hypothetical protein, PP_1857 family. | 0.530 |
SFE23179.1 | SFE23199.1 | SAMN04489710_12045 | SAMN04489710_12046 | formyl-CoA transferase; Belongs to the CoA-transferase III family. | hydroxymethylglutaryl-CoA lyase. | 0.881 |
SFE23179.1 | SFE23211.1 | SAMN04489710_12045 | SAMN04489710_12047 | formyl-CoA transferase; Belongs to the CoA-transferase III family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.610 |
SFE23179.1 | SFE23229.1 | SAMN04489710_12045 | SAMN04489710_12048 | formyl-CoA transferase; Belongs to the CoA-transferase III family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.435 |
page 1 of 2