STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE24609.1Transcriptional regulator, LacI family. (370 aa)    
Predicted Functional Partners:
SFD81386.1
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
 
 
 
 0.940
SFD33003.1
Glutamate synthase (NADH) large subunit.
    
 
 0.903
SFD90409.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
    
 
 0.787
SFE28073.1
Phosphocarrier protein.
   
 
 0.762
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
   0.747
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.733
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
   0.716
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.716
SFE17324.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
 
 
 0.661
SFD82406.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.577
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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