Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFE26485.1TRAP-type C4-dicarboxylate transport system, small permease component. (176 aa)    
Predicted Functional Partners:
SFE26459.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
 
 0.992
SFE26518.1
TRAP transporter, DctM subunit.
 
 0.979
SFD92915.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
  0.821
SFD62031.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
  0.820
SFE03102.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
  0.818
SFD39573.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.800
SFD96664.1
TRAP transporter, DctM subunit.
 
 0.793
SFE03120.1
TRAP transporter, DctM subunit.
 
 0.789
SFD92931.1
TRAP transporter, DctM subunit.
 
 0.783
SFD43541.1
TRAP-type C4-dicarboxylate transport system, small permease component.
     
  0.779
Your Current Organism:
Acidovorax konjaci
NCBI taxonomy Id: 32040
Other names: A. konjaci, ATCC 33996, Acidivorax konjaci, CCUG 17394, CFBP 4460, CIP 106439, DSM 7481, ICMP 7733, JCM 2397, LMG 5691, LMG:5691, NCPPB 3698, PDDCC 7733, PDDCC:7733, Pseudomonas avenae subsp. konjaci, Pseudomonas pseudoalcaligenes subsp. konjaci, strain K2
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