| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMF_108 | ccmA | AMF_108 | AMF_105 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.513 |
| AMF_108 | dcd | AMF_108 | AMF_107 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | 0.539 |
| AMF_108 | murA | AMF_108 | AMF_106 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA); Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.591 |
| AMF_482 | ccmA | AMF_482 | AMF_105 | Conserved hypothetical protein; Possible subunit of a heme lyase. | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.621 |
| AMF_482 | ccmB | AMF_482 | AMF_851 | Conserved hypothetical protein; Possible subunit of a heme lyase. | Heme exporter protein B (ccmB); Psort: bacterial inner membrane --- Certainty= 0.686(Affirmative); COG2386 CcmB ABC-type transport system involved in cytochrome c biogenesis, permease component. | 0.554 |
| AMF_482 | ccmC | AMF_482 | AMF_131 | Conserved hypothetical protein; Possible subunit of a heme lyase. | Cytochrome c-type biogenesis protein (ccmC); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.859 |
| AMF_482 | ccmE | AMF_482 | AMF_330 | Conserved hypothetical protein; Possible subunit of a heme lyase. | Cytochrome c-type biogenesis protein (ccmE); Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.895 |
| AMF_482 | ccmF | AMF_482 | AMF_882 | Conserved hypothetical protein; Possible subunit of a heme lyase. | Cytochrome c-type biogenesis protein (ccmF); Psort: bacterial inner membrane --- Certainty= 0.529(Affirmative); COG1138 CcmF cytochrome c biogenesis factor. | 0.924 |
| AMF_482 | dsbE | AMF_482 | AMF_115 | Conserved hypothetical protein; Possible subunit of a heme lyase. | Thiol:disulfide interchange protein (dsbE); Psort: bacterial inner membrane --- Certainty= 0.414(Affirmative); COG0526 TrxA Thiol-disulfide isomerase and thioredoxins. | 0.904 |
| ccmA | AMF_108 | AMF_105 | AMF_108 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | 0.513 |
| ccmA | AMF_482 | AMF_105 | AMF_482 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Conserved hypothetical protein; Possible subunit of a heme lyase. | 0.621 |
| ccmA | ccmB | AMF_105 | AMF_851 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter protein B (ccmB); Psort: bacterial inner membrane --- Certainty= 0.686(Affirmative); COG2386 CcmB ABC-type transport system involved in cytochrome c biogenesis, permease component. | 0.995 |
| ccmA | ccmC | AMF_105 | AMF_131 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein (ccmC); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.989 |
| ccmA | ccmE | AMF_105 | AMF_330 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein (ccmE); Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. | 0.955 |
| ccmA | ccmF | AMF_105 | AMF_882 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Cytochrome c-type biogenesis protein (ccmF); Psort: bacterial inner membrane --- Certainty= 0.529(Affirmative); COG1138 CcmF cytochrome c biogenesis factor. | 0.668 |
| ccmA | dcd | AMF_105 | AMF_107 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | 0.754 |
| ccmA | dsbE | AMF_105 | AMF_115 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Thiol:disulfide interchange protein (dsbE); Psort: bacterial inner membrane --- Certainty= 0.414(Affirmative); COG0526 TrxA Thiol-disulfide isomerase and thioredoxins. | 0.767 |
| ccmA | murA | AMF_105 | AMF_106 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA); Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.746 |
| ccmA | murF | AMF_105 | AMF_599 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase (murF); Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.416 |
| ccmB | AMF_482 | AMF_851 | AMF_482 | Heme exporter protein B (ccmB); Psort: bacterial inner membrane --- Certainty= 0.686(Affirmative); COG2386 CcmB ABC-type transport system involved in cytochrome c biogenesis, permease component. | Conserved hypothetical protein; Possible subunit of a heme lyase. | 0.554 |
