node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMF_108 | ccmA | AMF_108 | AMF_105 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.518 |
AMF_108 | dcd | AMF_108 | AMF_107 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | 0.542 |
AMF_108 | murA | AMF_108 | AMF_106 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA); Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.589 |
AMF_108 | polA | AMF_108 | AMF_914 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | DNA polymerase I (polA); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.471 |
ccmA | AMF_108 | AMF_105 | AMF_108 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | 0.518 |
ccmA | dcd | AMF_105 | AMF_107 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | 0.761 |
ccmA | murA | AMF_105 | AMF_106 | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA); Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.746 |
coaD | dcd | AMF_379 | AMF_107 | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | 0.459 |
dcd | AMF_108 | AMF_107 | AMF_108 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.141(Affirmative). | 0.542 |
dcd | ccmA | AMF_107 | AMF_105 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | Heme exporter protein (ccmA); Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.761 |
dcd | coaD | AMF_107 | AMF_379 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.459 |
dcd | dut | AMF_107 | AMF_598 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | Deoxyuridine 5'triphosphate nucleotidohydrolase (dut); This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.924 |
dcd | murA | AMF_107 | AMF_106 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA); Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.800 |
dcd | ndk | AMF_107 | AMF_859 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.920 |
dcd | polA | AMF_107 | AMF_914 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | DNA polymerase I (polA); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.489 |
dcd | pyrE | AMF_107 | AMF_062 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | Orotate phosphoribosyltransferase (pyrE); Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.482 |
dcd | pyrG | AMF_107 | AMF_015 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | CTP synthase (pyrG); Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.915 |
dcd | thy1 | AMF_107 | AMF_127 | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | THY1 protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.661 |
dut | dcd | AMF_598 | AMF_107 | Deoxyuridine 5'triphosphate nucleotidohydrolase (dut); This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Deoxycytidine triphosphate deaminase (dcd); Catalyzes the deamination of dCTP to dUTP. | 0.924 |
dut | ndk | AMF_598 | AMF_859 | Deoxyuridine 5'triphosphate nucleotidohydrolase (dut); This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.938 |