STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMF_181Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.727(Affirmative). (497 aa)    
Predicted Functional Partners:
AMF_180
Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.486(Affirmative).
       0.664
ankA
Ankyrin (ankA); Psort: bacterial cytoplasm --- Certainty= 0.332(Affirmative); COG0666 Arp ankyrin repeat proteins.
    
 
 0.610
AMF_051
Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial outer membrane --- Certainty= 0.530(Affirmative) bacterial periplasmic space --- Certainty= 0.164(Affirmative).
    
 
 0.559
AMF_476
Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.192(Affirmative).
    
 
 0.559
AMF_710
Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.128(Affirmative).
    
 
 0.559
dhkA
Sensory box histidine kinase/response regulator (dhkA); Psort: bacterial inner membrane --- Certainty= 0.491(Affirmative); COG0642 Signal transduction histidine kinase.
  
   
 0.530
AMF_160
Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial periplasmic space --- Certainty= 0.701(Affirmative) bacterial outer membrane --- Certainty= 0.317(Affirmative); signalP: Prediction: Signal peptide Signal peptide probability: 0.741 Max cleavage site probability: 0.700 between pos. 27 and 28.
      
 0.472
AMF_704
Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial cytoplasm --- Certainty= 0.292(Affirmative).
      
 0.472
ubiH
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (ubiH); Psort: bacterial inner membrane --- Certainty= 0.238(Affirmative); COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
      
 0.472
tolB
TOLB protein precursor (tolB); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
       0.466
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.