Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroA | dnaE | AMF_214 | AMF_213 | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. | DNA polymerase III, alpha subunit (dnaE); Psort: bacterial inner membrane --- Certainty= 0.113(Affirmative); COG0587 DnaE DNA polymerase III alpha subunit. | 0.485 |
| aroA | pheT | AMF_214 | AMF_670 | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. | phenylalanyl-tRNA synthetase beta chain (pheT); Psort: bacterial inner membrane --- Certainty= 0.193(Affirmative); COG0072 PheT phenylalanyl-tRNA synthetase beta subunit. | 0.547 |
| aroA | putA | AMF_214 | AMF_435 | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. | 1-pyrroline-5-carboxylate dehydrogenase (putA); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.495 |
| aroA | putA-2 | AMF_214 | AMF_438 | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. | 1-pyrroline-5-carboxylate dehydrogenase (putA); N-terminal end of AMF_435 (putA); psort: bacterial cytoplasm --- Certainty= 0.539(Affirmative); COG1012 PutA NAD-dependent aldehyde dehydrogenase. | 0.495 |
| dnaE | aroA | AMF_213 | AMF_214 | DNA polymerase III, alpha subunit (dnaE); Psort: bacterial inner membrane --- Certainty= 0.113(Affirmative); COG0587 DnaE DNA polymerase III alpha subunit. | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. | 0.485 |
| dnaE | pheT | AMF_213 | AMF_670 | DNA polymerase III, alpha subunit (dnaE); Psort: bacterial inner membrane --- Certainty= 0.113(Affirmative); COG0587 DnaE DNA polymerase III alpha subunit. | phenylalanyl-tRNA synthetase beta chain (pheT); Psort: bacterial inner membrane --- Certainty= 0.193(Affirmative); COG0072 PheT phenylalanyl-tRNA synthetase beta subunit. | 0.589 |
| pheT | aroA | AMF_670 | AMF_214 | phenylalanyl-tRNA synthetase beta chain (pheT); Psort: bacterial inner membrane --- Certainty= 0.193(Affirmative); COG0072 PheT phenylalanyl-tRNA synthetase beta subunit. | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. | 0.547 |
| pheT | dnaE | AMF_670 | AMF_213 | phenylalanyl-tRNA synthetase beta chain (pheT); Psort: bacterial inner membrane --- Certainty= 0.193(Affirmative); COG0072 PheT phenylalanyl-tRNA synthetase beta subunit. | DNA polymerase III, alpha subunit (dnaE); Psort: bacterial inner membrane --- Certainty= 0.113(Affirmative); COG0587 DnaE DNA polymerase III alpha subunit. | 0.589 |
| putA | aroA | AMF_435 | AMF_214 | 1-pyrroline-5-carboxylate dehydrogenase (putA); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. | 0.495 |
| putA-2 | aroA | AMF_438 | AMF_214 | 1-pyrroline-5-carboxylate dehydrogenase (putA); N-terminal end of AMF_435 (putA); psort: bacterial cytoplasm --- Certainty= 0.539(Affirmative); COG1012 PutA NAD-dependent aldehyde dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase (aroA); Psort: bacterial inner membrane --- Certainty= 0.257(Affirmative); COG0128 AroA 5-enolpyruvylshikimate-3-phosphate synthase. | 0.495 |