Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMF_308 | proP-3 | AMF_308 | AMF_309 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.274(Affirmative). | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- Certainty= 0.603(Affirmative); COG0477 ProP Permeases of the major facilitator superfamily. | 0.489 |
| AMF_342 | proP-3 | AMF_342 | AMF_309 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.302(Affirmative); COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- Certainty= 0.603(Affirmative); COG0477 ProP Permeases of the major facilitator superfamily. | 0.444 |
| aprE | proP-3 | AMF_175 | AMF_309 | Alkaline protease secretion protein (aprE); Psort: bacterial inner membrane --- Certainty= 0.569(Affirmative); COG1404 aprE subtilisin-like serine proteases. | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- Certainty= 0.603(Affirmative); COG0477 ProP Permeases of the major facilitator superfamily. | 0.451 |
| guaA | proP-3 | AMF_897 | AMF_309 | GMP synthase (glutamine-hydrolyzing) (guaA); Catalyzes the synthesis of GMP from XMP. | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- Certainty= 0.603(Affirmative); COG0477 ProP Permeases of the major facilitator superfamily. | 0.489 |
| proP-3 | AMF_308 | AMF_309 | AMF_308 | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- Certainty= 0.603(Affirmative); COG0477 ProP Permeases of the major facilitator superfamily. | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.274(Affirmative). | 0.489 |
| proP-3 | AMF_342 | AMF_309 | AMF_342 | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- Certainty= 0.603(Affirmative); COG0477 ProP Permeases of the major facilitator superfamily. | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.302(Affirmative); COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases. | 0.444 |
| proP-3 | aprE | AMF_309 | AMF_175 | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- Certainty= 0.603(Affirmative); COG0477 ProP Permeases of the major facilitator superfamily. | Alkaline protease secretion protein (aprE); Psort: bacterial inner membrane --- Certainty= 0.569(Affirmative); COG1404 aprE subtilisin-like serine proteases. | 0.451 |
| proP-3 | guaA | AMF_309 | AMF_897 | Proline/betaine transporter (proP); High sequence identity to AMF_303 and AMF_304 Higher sequence similarity to other Anaplasmataceae than AMF_303 and AMF_304; psort: bacterial inner membrane --- Certainty= 0.603(Affirmative); COG0477 ProP Permeases of the major facilitator superfamily. | GMP synthase (glutamine-hydrolyzing) (guaA); Catalyzes the synthesis of GMP from XMP. | 0.489 |