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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMF_408Hypothetical protein called by Glimmer 2; Significant sequence similarity with AMF_402, AMF_401, and AMF_403 ; psort: bacterial inner membrane --- Certainty= 0.722(Affirmative). (720 aa)    
Predicted Functional Partners:
AMF_407
Hypothetical protein called by Glimmer 2; Significant sequence similarity to AMF_406, AMF_405, AMF_403, and AMF_404 ; psort: bacterial periplasmic space --- Certainty= 0.839(Affirmative).
       0.454
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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