| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMF_442 | rlpA | AMF_442 | AMF_440 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.138(Affirmative). | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.445 |
| AMF_442 | xthA2 | AMF_442 | AMF_441 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.138(Affirmative). | Exodeoxyribonuclease III (xthA2); Psort: bacterial cytoplasm --- Certainty= 0.293(Affirmative); COG0708 XthA exonuclease III. | 0.779 |
| agk | mutL | AMF_565 | AMF_248 | Acetylglutamate kinase (agk); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.412 |
| agk | radA | AMF_565 | AMF_116 | Acetylglutamate kinase (agk); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | DNA repair protein (radA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.432 |
| agk | rlpA | AMF_565 | AMF_440 | Acetylglutamate kinase (agk); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.412 |
| metS | mutL | AMF_762 | AMF_248 | methionyl-tRNA synthetase (metS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.412 |
| metS | radA | AMF_762 | AMF_116 | methionyl-tRNA synthetase (metS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | DNA repair protein (radA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.487 |
| metS | rlpA | AMF_762 | AMF_440 | methionyl-tRNA synthetase (metS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.432 |
| mutL | agk | AMF_248 | AMF_565 | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Acetylglutamate kinase (agk); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | 0.412 |
| mutL | metS | AMF_248 | AMF_762 | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | methionyl-tRNA synthetase (metS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.412 |
| mutL | radA | AMF_248 | AMF_116 | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | DNA repair protein (radA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.444 |
| mutL | rlpA | AMF_248 | AMF_440 | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.412 |
| mutL | xthA2 | AMF_248 | AMF_441 | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | Exodeoxyribonuclease III (xthA2); Psort: bacterial cytoplasm --- Certainty= 0.293(Affirmative); COG0708 XthA exonuclease III. | 0.421 |
| radA | agk | AMF_116 | AMF_565 | DNA repair protein (radA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | Acetylglutamate kinase (agk); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | 0.432 |
| radA | metS | AMF_116 | AMF_762 | DNA repair protein (radA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | methionyl-tRNA synthetase (metS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.487 |
| radA | mutL | AMF_116 | AMF_248 | DNA repair protein (radA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | DNA mismatch repair protein (mutL); This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.444 |
| radA | rlpA | AMF_116 | AMF_440 | DNA repair protein (radA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.412 |
| rlpA | AMF_442 | AMF_440 | AMF_442 | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.138(Affirmative). | 0.445 |
| rlpA | agk | AMF_440 | AMF_565 | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | Acetylglutamate kinase (agk); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate. | 0.412 |
| rlpA | metS | AMF_440 | AMF_762 | Rare lipoprotein A precursor (rlpA); Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | methionyl-tRNA synthetase (metS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.432 |
