Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMF_445 | rplU | AMF_445 | AMF_447 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.503(Affirmative). | 50S ribosomal protein L21 (rplU); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.701 |
| AMF_445 | rpmA | AMF_445 | AMF_446 | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.503(Affirmative). | 50S ribosomal protein L27 (rpmA); Psort: bacterial cytoplasm --- Certainty= 0.450(Affirmative); COG0211 RpmA ribosomal protein L27. | 0.701 |
| rplU | AMF_445 | AMF_447 | AMF_445 | 50S ribosomal protein L21 (rplU); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.503(Affirmative). | 0.701 |
| rplU | rpmA | AMF_447 | AMF_446 | 50S ribosomal protein L21 (rplU); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 50S ribosomal protein L27 (rpmA); Psort: bacterial cytoplasm --- Certainty= 0.450(Affirmative); COG0211 RpmA ribosomal protein L27. | 0.999 |
| rpmA | AMF_445 | AMF_446 | AMF_445 | 50S ribosomal protein L27 (rpmA); Psort: bacterial cytoplasm --- Certainty= 0.450(Affirmative); COG0211 RpmA ribosomal protein L27. | Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.503(Affirmative). | 0.701 |
| rpmA | rplU | AMF_446 | AMF_447 | 50S ribosomal protein L27 (rpmA); Psort: bacterial cytoplasm --- Certainty= 0.450(Affirmative); COG0211 RpmA ribosomal protein L27. | 50S ribosomal protein L21 (rplU); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |