Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMF_797 | AMF_798 | AMF_797 | AMF_798 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_798, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AMF_532, AMF_536, AMF_799, AMF_873, AMF_756, AMF_24, AMF_946, AMF_800, AMF_535, and AMF_48; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_797, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AMF_532, AMF_536, AMF_799, AMF_873, AMF_756, AMF_24, AMF_946, AMF_800, AMF_535, and AMF_48; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). | 0.415 |
| AMF_797 | virB4-2 | AMF_797 | AMF_796 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_798, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AMF_532, AMF_536, AMF_799, AMF_873, AMF_756, AMF_24, AMF_946, AMF_800, AMF_535, and AMF_48; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). | VirB4 protein; Psort: bacterial cytoplasm --- Certainty= 0.571(Affirmative); COG3451 VirB4 type IV secretory pathway, VirB4 components. | 0.492 |
| AMF_798 | AMF_797 | AMF_798 | AMF_797 | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_797, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AMF_532, AMF_536, AMF_799, AMF_873, AMF_756, AMF_24, AMF_946, AMF_800, AMF_535, and AMF_48; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_798, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AMF_532, AMF_536, AMF_799, AMF_873, AMF_756, AMF_24, AMF_946, AMF_800, AMF_535, and AMF_48; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). | 0.415 |
| virB4-2 | AMF_797 | AMF_796 | AMF_797 | VirB4 protein; Psort: bacterial cytoplasm --- Certainty= 0.571(Affirmative); COG3451 VirB4 type IV secretory pathway, VirB4 components. | Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_798, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AMF_532, AMF_536, AMF_799, AMF_873, AMF_756, AMF_24, AMF_946, AMF_800, AMF_535, and AMF_48; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). | 0.492 |