Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMF_798Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_797, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AMF_532, AMF_536, AMF_799, AMF_873, AMF_756, AMF_24, AMF_946, AMF_800, AMF_535, and AMF_48; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative). (125 aa)    
Predicted Functional Partners:
AMF_797
Called by Glimmer 2; Conserved hypothetical protein called by Glimmer 2; Significant similarity to AMF_798, AMF_154, AMF_755, AMF_801, AMF_59, AMF_870, AMF_33, AMF_23, AMF_49, AMF_947, AMF_57, AMF_532, AMF_536, AMF_799, AMF_873, AMF_756, AMF_24, AMF_946, AMF_800, AMF_535, and AMF_48; psort: bacterial inner membrane --- Certainty= 0.414(Affirmative).
      
0.415
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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