STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ana29Ana29 protein; Psort: bacterial inner membrane --- Certainty= 0.618(Affirmative). (265 aa)    
Predicted Functional Partners:
oma87
Outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
      
 0.554
omp9
Outer membrane protein 9; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.444(Affirmative).
      
 0.554
tuf
Translation elongation factor Tu (tuf); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.551
tuf-2
Translation elongation factor Tu (tuf); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.551
AMF_812
Hypothetical protein called by Glimmer 2; psort: bacterial inner membrane --- Certainty= 0.002(Affirmative).
       0.532
msp3
Major surface protein 3 (MSP3); Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.930(Affirmative).
      
 0.414
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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