STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opag1Msp2 operon associated protein 1; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.921(Affirmative). (134 aa)    
Predicted Functional Partners:
opag3
Msp2 operon associated protein 3; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.264(Affirmative).
     
 0.898
msp2
Major surface protein 2 (MSP2); Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.934(Affirmative).
     
 0.855
opag2
Msp2 operon associated protein 2; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.548(Affirmative).
     
 0.850
omp1
Outer membrane protein 1; Member of msp2 superfamily; Also known as Ana37; psort: bacterial periplasmic space --- Certainty= 0.861(Affirmative).
     
 0.735
omp7
Outer membrane protein 7; Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.508(Affirmative).
      
 0.554
ndk
Nucleoside diphosphate kinase (ndk); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
      
 0.551
omp15
Outer membrane protein 15; Member of the msp2 superfamily; Truncated compared to St. Maries; psort: bacterial inner membrane --- Certainty= 0.100(Affirmative).
      
 0.476
omp5
Outer membrane protein 5; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.401(Affirmative).
      
 0.435
omp4
Outer membrane protein 4; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.790(Affirmative).
      
 0.416
virB3
VirB3; Psort: bacterial inner membrane --- Certainty= 0.213(Affirmative); COG3702 VirB3 type IV secretory pathway, VirB3 components.
      
 0.412
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.