STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
omp6Outer membrane protein 6; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.794(Affirmative). (153 aa)    
Predicted Functional Partners:
omp7
Outer membrane protein 7; Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.508(Affirmative).
     
0.679
omp8
Outer membrane protein 8; Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.356(Affirmative).
     
0.562
omp3
Outer membrane protein 3; Member of msp2 superfamily; Significant sequence similarity to AMF_56 (highest in C-terminal end); psort: bacterial cytoplasm --- Certainty= 0.225(Affirmative).
      
 0.554
omp11
Outer membrane protein 11; Member of the msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.785(Affirmative).
      
 0.554
omp2
Outer membrane protein 2; Member of msp2 superfamily; psort: bacterial cytoplasm --- Certainty= 0.481(Affirmative).
      
 0.553
omp15
Outer membrane protein 15; Member of the msp2 superfamily; Truncated compared to St. Maries; psort: bacterial inner membrane --- Certainty= 0.100(Affirmative).
      
 0.552
omp14
Outer membrane protein 14; Member of the msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.153(Affirmative).
      
 0.499
omp1
Outer membrane protein 1; Member of msp2 superfamily; Also known as Ana37; psort: bacterial periplasmic space --- Certainty= 0.861(Affirmative).
      
 0.497
msp3
Major surface protein 3 (MSP3); Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.930(Affirmative).
      
 0.479
purA
Adenylosuccinate synthetase (purA); C-terminal end of the full-length purA; psort: bacterial cytoplasm --- Certainty= 0.325(Affirmative); COG0104 PurA Adenylosuccinate synthase.
      
 0.438
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.