Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
omp8Outer membrane protein 8; Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.356(Affirmative). (402 aa)    
Predicted Functional Partners:
omp9
Outer membrane protein 9; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.444(Affirmative).
     
0.594
omp7
Outer membrane protein 7; Member of msp2 superfamily; psort: bacterial periplasmic space --- Certainty= 0.508(Affirmative).
     
0.589
omp6
Outer membrane protein 6; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.794(Affirmative).
     
0.531
omp10
Outer membrane protein 10; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.281(Affirmative).
     
0.513
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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