STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
omp13Outer membrane protein 13; Member of the msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.353(Affirmative). (352 aa)    
Predicted Functional Partners:
omp12
Outer membrane protein 12; Member of the msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.940(Affirmative).
     
 0.739
omp14
Outer membrane protein 14; Member of the msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.153(Affirmative).
      
 0.497
omp5
Outer membrane protein 5; Member of msp2 superfamily; psort: bacterial inner membrane --- Certainty= 0.401(Affirmative).
      
 0.497
omp9
Outer membrane protein 9; Member of msp2 superfamily; psort: bacterial outer membrane --- Certainty= 0.444(Affirmative).
      
 0.493
ftsZ
Cell division protein (ftsZ); Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
       0.419
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.