STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cinACompetence / damage-inducible protein (cinA); Psort: bacterial inner membrane --- Certainty= 0.304(Affirmative); COG1058 CinA predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA. (174 aa)    
Predicted Functional Partners:
nadD
Nicotinate-nucleotide adenylyltransferase (nadD); Psort: bacterial inner membrane --- Certainty= 0.268(Affirmative); COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase.
 
 
 0.952
nadC
Nicotinate-nucleotide pyrophosphorylase (nadC); Psort: bacterial cytoplasm --- Certainty= 0.379(Affirmative); COG0157 NadC nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
     
 0.913
surE
Stationary-phase survival protein (surE); Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.903
apaG
APAG protein; Psort: bacterial cytoplasm --- Certainty= 0.017(Affirmative); COG2967 ApaG uncharacterized protein affecting Mg2+/Co2+ transport.
      
 0.711
pgsA
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase (pgsA); Psort: bacterial inner membrane --- Certainty= 0.359(Affirmative); COG0558 PgsA phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.592
thrS
Threonyl-tRNA synthetase (thrS); Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
       0.576
infC
Translation initiation factor IF-3 (infC); Psort: bacterial cytoplasm --- Certainty= 0.223(Affirmative); COG0290 InfC translation initiation factor IF3; Belongs to the IF-3 family.
       0.491
recA
recA protein (recA); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
  
 0.480
nadE
NH3-dependent NAD+ synthetase protein (nadE); Psort: bacterial inner membrane --- Certainty= 0.172(Affirmative); COG0171 NadE NAD synthase; Belongs to the NAD synthetase family.
     
 0.441
Your Current Organism:
Anaplasma marginale
NCBI taxonomy Id: 320483
Other names: A. marginale str. Florida, Anaplasma marginale str. Florida, Anaplasma marginale strain Florida
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