STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cruPLycopene cyclase CruP; Similar to sll0659 of Synechocystis sp. PCC 6803. (513 aa)    
Predicted Functional Partners:
crtQ
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
  
 0.986
crtR
Beta-carotene oxygenase CrtR; Similar to sll1468 of Synechocystis sp. PCC 6803.
   
 
 0.979
crtH
Carotenoid cis-trans isomerase; Similar to sll0033 of Synechocystis sp. PCC 6803.
 
 
 0.958
crtW
Beta-carotene oxygenase (ketolase); Similar to gll1728 of Gloeobacter violaceus; di-iron oxygenase similar to fatty acid desaturases.
   
 
 0.957
cruA
Lycopene cyclase CruA; Similar to sll0147 of Synechocystis sp. PCC 6803.
  
  
0.941
crtU
Beta-carotene desaturase; Similar to sll0254 of Synechocystis sp. PCC 6803.
  
  
 0.923
crtB
Phytoene synthase; Similar to slr1255 of Synechocystis sp. PCC 6803.
  
  
 0.849
crtP
Phytoene dehydrogenase; Similar to slr1254 of Synechocystis sp. PCC 6803.
  
   
 0.779
ACA98652.1
Conserved hypothetical protein; Similar to sll0364 of Synechocystis sp. PCC 6803.
  
     0.765
ACB00824.1
Peptidase family M41; Similar to sll1738 of Synechocystis sp. PCC 6803.
  
     0.751
Your Current Organism:
Synechococcus sp. PCC7002
NCBI taxonomy Id: 32049
Other names: Agmenellum quadruplicatum, Agmenellum quadruplicatum PR-6, S. sp. PCC 7002, Synechococcus PCC7002 PR-6, Synechococcus sp. (ATCC 27264), Synechococcus sp. (PCC 7002), Synechococcus sp. (strain PCC 7002), Synechococcus sp. PCC 7002
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