Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACA98058.1 | ACA98197.1 | SYNPCC7002_A0041 | SYNPCC7002_A0184 | Conserved hypothetical protein; Similar to sll1586 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | 0.510 |
ACA98058.1 | ACA98782.1 | SYNPCC7002_A0041 | SYNPCC7002_A0777 | Conserved hypothetical protein; Similar to sll1586 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to slr1914 of Synechocystis sp. PCC 6803. | 0.701 |
ACA98058.1 | ACA98966.1 | SYNPCC7002_A0041 | SYNPCC7002_A0963 | Conserved hypothetical protein; Similar to sll1586 of Synechocystis sp. PCC 6803. | Subtilase family domain protein; Similar to slr0459 in Synechocystis sp. PCC 6803. | 0.729 |
ACA98058.1 | ACA99482.1 | SYNPCC7002_A0041 | SYNPCC7002_A1491 | Conserved hypothetical protein; Similar to sll1586 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to sll0839 in Synechocystis sp. PCC 6803. | 0.689 |
ACA98197.1 | ACA98058.1 | SYNPCC7002_A0184 | SYNPCC7002_A0041 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to sll1586 of Synechocystis sp. PCC 6803. | 0.510 |
ACA98197.1 | ACA98198.1 | SYNPCC7002_A0184 | SYNPCC7002_A0185 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to Avar03005219 in Anabaena variabilis ATCC29413. | 0.572 |
ACA98197.1 | ACA98782.1 | SYNPCC7002_A0184 | SYNPCC7002_A0777 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to slr1914 of Synechocystis sp. PCC 6803. | 0.553 |
ACA98197.1 | ACA98800.1 | SYNPCC7002_A0184 | SYNPCC7002_A0796 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to ssr2439 of Synechocystis sp. PCC 6803. | 0.596 |
ACA98197.1 | ACA98966.1 | SYNPCC7002_A0184 | SYNPCC7002_A0963 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Subtilase family domain protein; Similar to slr0459 in Synechocystis sp. PCC 6803. | 0.522 |
ACA98197.1 | ACA99482.1 | SYNPCC7002_A0184 | SYNPCC7002_A1491 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to sll0839 in Synechocystis sp. PCC 6803. | 0.598 |
ACA98197.1 | ACA99926.1 | SYNPCC7002_A0184 | SYNPCC7002_A1939 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Hypothetical protein. | 0.732 |
ACA98197.1 | ACB00470.1 | SYNPCC7002_A0184 | SYNPCC7002_A2492 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Conserved hypothetical membrane protein; Similar to sll0218 of Synechocystis sp. strain PCC 6803. | 0.508 |
ACA98197.1 | ACB00503.1 | SYNPCC7002_A0184 | SYNPCC7002_A2526 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to asr2781 of Nostoc sp. strain PCC 7120. | 0.523 |
ACA98197.1 | psaM | SYNPCC7002_A0184 | SYNPCC7002_A1834 | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | Similar to asr4657 of Nostoc sp. PCC 7120. | 0.622 |
ACA98198.1 | ACA98197.1 | SYNPCC7002_A0185 | SYNPCC7002_A0184 | Conserved hypothetical protein; Similar to Avar03005219 in Anabaena variabilis ATCC29413. | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | 0.572 |
ACA98782.1 | ACA98058.1 | SYNPCC7002_A0777 | SYNPCC7002_A0041 | Conserved hypothetical protein; Similar to slr1914 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to sll1586 of Synechocystis sp. PCC 6803. | 0.701 |
ACA98782.1 | ACA98197.1 | SYNPCC7002_A0777 | SYNPCC7002_A0184 | Conserved hypothetical protein; Similar to slr1914 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to sll1862 of Synechocystis sp. PCC 6803. | 0.553 |
ACA98782.1 | ACA98966.1 | SYNPCC7002_A0777 | SYNPCC7002_A0963 | Conserved hypothetical protein; Similar to slr1914 of Synechocystis sp. PCC 6803. | Subtilase family domain protein; Similar to slr0459 in Synechocystis sp. PCC 6803. | 0.763 |
ACA98782.1 | ACA99482.1 | SYNPCC7002_A0777 | SYNPCC7002_A1491 | Conserved hypothetical protein; Similar to slr1914 of Synechocystis sp. PCC 6803. | Conserved hypothetical protein; Similar to sll0839 in Synechocystis sp. PCC 6803. | 0.772 |
ACA98782.1 | ACA99926.1 | SYNPCC7002_A0777 | SYNPCC7002_A1939 | Conserved hypothetical protein; Similar to slr1914 of Synechocystis sp. PCC 6803. | Hypothetical protein. | 0.712 |
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